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HelixCode Audit Implementation Tracker

Purpose: Track progress on fixing all issues identified in the Comprehensive Project Audit 2026 Created: 2026-01-10 Status: Active

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Critical Issues (12 Items)

C1: Failing Test - TestExtractPythonSymbols

  • Status: [ ] Not Started
  • File: internal/repomap/repomap_test.go
  • Issue: TempDir RemoveAll cleanup failure
  • Owner: Unassigned
  • Verified By: Pending

C2: Stub Compression Methods (11 methods)

  • Status: [ ] Not Started
  • File: internal/cognee/performance_optimizer.go:1187-1256
  • Methods:
    • NeuralSymbolicCompression.Compress()
    • NeuralSymbolicCompression.Decompress()
    • AdaptiveHuffmanCompression.Compress()
    • AdaptiveHuffmanCompression.Decompress()
    • NeuralEmbeddingCompression.Compress()
    • NeuralEmbeddingCompression.Decompress()
    • ParallelNeuralSymbolicTraversal.Traverse()
    • GPUAcceleratedTraversal.Traverse()
    • MemoryOptimizedTraversal.Traverse()
    • AdaptiveMemoryAwarePartitioning.Partition()
    • NeuralBasedPartitioning.Partition()
  • Owner: Unassigned

C3: Config Stub Methods

  • Status: [ ] Not Started
  • File: internal/config/config.go
  • Methods:
    • UpdateConfigFromMap() (lines 566-568)
    • SaveTemplate() (lines 1464-1465)
    • LoadTemplate() (lines 1482-1483)
  • Owner: Unassigned

C4: Hardcoded Model Alternatives

  • Status: [ ] Not Started
  • File: internal/llm/model_discovery.go:1136-1149
  • Issue: Returns hardcoded list instead of querying APIs
  • Owner: Unassigned

C5: Hardcoded Usage Analytics

  • Status: [ ] Not Started
  • File: internal/llm/usage_analytics.go:566,581,583
  • Issue: Hardcoded placeholder metrics
  • Owner: Unassigned

C6: Host Optimizer Stub

  • Status: [ ] Not Started
  • File: internal/cognee/host_optimizer.go:7-18
  • Issue: Complete stub returning unchanged config
  • Owner: Unassigned

C7: Tree-sitter Placeholder

  • Status: [ ] Not Started
  • File: internal/tools/mapping/treesitter.go:61-62,267-269
  • Issue: Placeholder parser implementation
  • Owner: Unassigned

C8: Silent Hardware Detection Failures

  • Status: [ ] Not Started
  • File: internal/hardware/detector.go:44-61
  • Issue: Returns success despite all detection failures
  • Owner: Unassigned

C9: Cache Error Hiding

  • Status: [ ] Not Started
  • File: internal/task/manager.go:257,263,302,307,337,343
  • Issue: Returns nil,nil hiding cache errors
  • Owner: Unassigned

C10: Transaction Verification Incomplete

  • Status: [ ] Not Started
  • File: internal/tools/multiedit/transaction.go:354-369
  • Issue: Incomplete conflict verification
  • Owner: Unassigned

C11: Zep Provider Query Format

  • Status: [ ] Not Started
  • File: internal/memory/providers/zep_provider.go:478
  • Issue: Placeholder query format
  • Owner: Unassigned

C12: Anima Provider Stub

  • Status: [ ] Not Started
  • File: internal/memory/providers/anima_provider.go:33-34
  • Issue: Stub AnimaClient
  • Owner: Unassigned

Test Coverage Tasks

Priority 1: Below 50% Coverage

Package Current Target Status Owner
internal/llm 44.9% 80% [ ]
internal/memory/providers 46.1% 80% [ ]
internal/workflow/planmode 39.7% 80% [ ]
shared/mobile-core 42.6% 80% [ ]
tests/e2e/challenges 49.0% 80% [ ]

Priority 2: 50-70% Coverage

Package Current Target Status Owner
internal/providers 51.7% 80% [ ]
internal/tools/mapping 53.8% 80% [ ]
internal/server 55.1% 80% [ ]
internal/tools 55.5% 80% [ ]
internal/tools/browser 55.1% 80% [ ]
internal/cognee 59.9% 80% [ ]
internal/tools/voice 60.2% 80% [ ]
internal/mcp 61.3% 80% [ ]
internal/focus 61.3% 80% [ ]
internal/tools/web 62.3% 80% [ ]
internal/editor/formats 62.6% 80% [ ]
internal/workflow 64.7% 80% [ ]
internal/workflow/autonomy 65.0% 80% [ ]
internal/tools/confirmation 65.0% 80% [ ]
internal/tools/filesystem 66.8% 80% [ ]
internal/rules 66.8% 80% [ ]
internal/hardware 67.5% 80% [ ]
internal/memory 67.8% 80% [ ]
internal/tools/shell 68.2% 80% [ ]
internal/llm/vision 68.3% 80% [ ]
internal/tools/multiedit 68.6% 80% [ ]
internal/agent/types 68.6% 80% [ ]
internal/redis 69.6% 80% [ ]

Priority 3: Applications (Very Low)

Application Current Target Status Owner
aurora-os 4.9% 50% [ ]
harmony-os 8.5% 50% [ ]
desktop 9.1% 50% [ ]
terminal-ui 9.6% 50% [ ]
cmd/cli 11.9% 50% [ ]

Priority 4: Untested LLM Providers

Provider File Status Owner
Copilot copilot_provider.go [ ]
KoboldAI koboldai_provider.go [ ]
Llama.cpp llamacpp_provider.go [ ]
Ollama ollama_provider.go [ ]
OpenAI openai_provider.go [ ]
OpenAI Compatible openai_compatible_provider.go [ ]
OpenRouter openrouter_provider.go [ ]
Tool Provider tool_provider.go [ ]
xAI xai_provider.go [ ]
Local Provider local_provider.go [ ]

API Implementation Tasks

MCP Server Management Endpoints

Endpoint Method Status Owner
/api/v1/mcp/servers GET [ ]
/api/v1/mcp/servers POST [ ]
/api/v1/mcp/servers/:id PUT [ ]
/api/v1/mcp/servers/:id DELETE [ ]
/api/v1/mcp/servers/:id/tools GET [ ]
/api/v1/mcp/servers/:id/tools/:name/execute POST [ ]

Workflow State/History Endpoints

Endpoint Method Status Owner
/api/v1/workflows/:id/history GET [ ]
/api/v1/workflows/:id/state GET [ ]
/api/v1/workflows/:id/pause POST [ ]
/api/v1/workflows/:id/resume POST [ ]
/api/v1/workflows/:id/rollback POST [ ]

Notification Management Endpoints

Endpoint Method Status Owner
/api/v1/notifications GET [ ]
/api/v1/notifications/rules POST [ ]
/api/v1/notifications/channels GET [ ]
/api/v1/notifications/test/:channel POST [ ]
/api/v1/notifications/templates/:id PUT [ ]

Feature Completion Tasks

Advanced Reasoning API

  • Status: [ ] Not Started
  • Documentation: CLI_Specs_5.md, Section 2, lines 71-82
  • Required:
    • GenerateWithReasoning() interface
    • ReasoningRequest type
    • ReasoningResponse type
    • Chain-of-thought strategy
    • Tree-of-thoughts strategy
    • Provider implementations (Anthropic, OpenAI, Azure)
  • Owner: Unassigned

CLI Commands

Command Group Status Subcommands Owner
helix worker [ ] register, list, health, capabilities
helix workflow [ ] history, pause, resume, rollback
helix notify [ ] send, rules, channels, test
helix session [ ] create, list, pause, resume, complete

Configuration Additions

Config Section Status Owner
reasoning: [ ]
mcp.servers: [ ]
notifications: (centralized) [ ]

Documentation Tasks

Missing Package READMEs

Package Status Owner
internal/agent [ ]
internal/workflow [ ]
internal/session [ ]
internal/llm/vision [ ]
internal/project [ ]

Documentation Updates

Document Task Status Owner
CLAUDE.md Sync with implemented CLI commands [ ]
API_REFERENCE.md Add missing endpoints [ ]
USER_MANUAL.md Update configuration options [ ]
Video Courses Create per VIDEO_COURSE_CURRICULUM.md [ ]
Website Update per documentation [ ]

Progress Tracking

Daily Standup Format

Date: YYYY-MM-DD
Completed:
- [item]

In Progress:
- [item]

Blocked:
- [item] - reason

Next:
- [item]

Weekly Summary Format

Week: [number]
Critical Issues Fixed: X/12
Test Coverage Delta: +X.X%
API Endpoints Added: X/16
Tests Added: X
Documentation Pages Updated: X

Verification Commands

Run All Tests

cd HelixCode && go test ./...

Check Coverage

cd HelixCode && go test -cover ./...

Check Specific Package

cd HelixCode && go test -cover -v ./internal/llm/...

Generate Coverage Report

cd HelixCode && go test -coverprofile=coverage.out ./...
cd HelixCode && go tool cover -html=coverage.out -o coverage.html

Verify Build

cd HelixCode && make build

Run Linter

cd HelixCode && make lint

Notes

Session Resume Instructions

  1. Read this file to understand current state
  2. Check last "Daily Standup" entry
  3. Continue from last "In Progress" items
  4. Update tracker after completing items

Quality Verification

Each completed item must be verified:

  1. Tests pass locally
  2. Coverage improved (if applicable)
  3. No new linter warnings
  4. Documentation updated (if applicable)
  5. Second review by team member

Tracker Version: 1.0 Last Updated: 2026-01-10