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import argparse
import json
import cv2
import csv
import os
import subprocess
import sys, math
from pathlib import Path
import yaml
import matplotlib.pyplot as plt
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from tqdm import tqdm
from models import model_selector
from utils.loggers import LOGGER
from utils.general import print_args
FILE = Path(__file__).resolve()
ROOT = FILE.parents[0]
if str(ROOT) not in sys.path:
sys.path.append(str(ROOT))
ROOT = Path(os.path.relpath(ROOT, Path.cwd()))
from utils.general import (
TQDM_BAR_FORMAT,
prefix,
increment_path,
check_yaml,
yaml_save,
check_dataset
)
from utils.dataloader import create_dataloader
from utils.operations import crop_image, magnitude_spectrum, phasemap_8bit
from utils.torch_utils import select_device
from torchmetrics.image import PeakSignalNoiseRatio as PSNR
cm, mm, um, nm = 1e-2, 1e-3, 1e-6, 1e-9
def compute_bpp(amp, likelihoods):
size = amp.size()
num_pixels = size[0] * size[2] * size[3]
return sum(torch.log(l).sum() / (-math.log(2) * num_pixels)
for l in likelihoods.values()).item()
@torch.inference_mode()
def val(
model,
dataloader,
config,
fn_prefix = 'val',
sample_fn = '0887.png',
savedir = None,
save_all_poh = False,
save_all_recon = False,
device:torch.device ='cpu',
):
"""Evaluates model on a dataset and logs performance metrics, results are saved to specific directories."""
LOGGER.info(prefix("[VAL]") + "Validation Start")
nb = len(dataloader)
# Configure
model = model.to(device)
model.eval()
sample_recon, sample_poh = None, None
all_poh_dir, all_recon_dir = None, None
per_image_metrics = []
if savedir is not None and save_all_poh:
all_poh_dir = savedir / "all_poh"
all_poh_dir.mkdir(parents=True, exist_ok=True)
if savedir is not None and save_all_recon:
all_recon_dir = savedir / "all_recon"
all_recon_dir.mkdir(parents=True, exist_ok=True)
# loss
recon_loss = nn.MSELoss().to(device)
psnr_loss = PSNR(data_range=1.0, reduction='elementwise_mean').to(device)
mloss = torch.zeros(2)
pbar = enumerate(dataloader)
pbar = tqdm(pbar, total=nb, bar_format=TQDM_BAR_FORMAT) # progress bar
with torch.no_grad():
for i, (imgs, masks, paths) in pbar:
imgs = imgs.float() / 255.
imgs = torch.where(imgs <= 0.04045, imgs / 12.92, ((imgs + 0.055) / 1.055)**(2.4)) # Linearize Intensity
imgs = torch.sqrt(imgs) # to Amplitude
imgs = imgs.to(device, non_blocking=True)
T = config['target']
roi_res = T['roi_res']
z = model(imgs)
slm = torch.exp(1j*z['output_poh'])
prop = model.propagator_forward(slm)
recon_field = prop['g_out']
if all_poh_dir is not None:
for batch_idx, img_path in enumerate(paths):
poh_name = Path(img_path).name
poh_path = all_poh_dir / poh_name
poh_map = phasemap_8bit(z['output_poh'][batch_idx].detach().permute((1, 2, 0)))
cv2.imwrite(str(poh_path), poh_map)
recon_amp = recon_field.abs()
recon_amp = crop_image(recon_amp, roi_res)
target_amp = crop_image(imgs, roi_res)
recon_amp *= (torch.sum(recon_amp * target_amp, (-2, -1), keepdim=True)
/ torch.sum(recon_amp * recon_amp, (-2, -1), keepdim=True))
batch_mse = recon_loss(recon_amp , target_amp).item()
batch_psnr = psnr_loss(recon_amp , target_amp).item()
mloss[0] += batch_mse
mloss[1] += batch_psnr
for batch_idx, img_path in enumerate(paths):
filename = Path(img_path).name
per_image_metrics.append({
"filename": filename,
"mse": batch_mse,
"psnr": batch_psnr,
})
if all_recon_dir is not None:
recon_path = all_recon_dir / filename
recon_img = (recon_amp[batch_idx].detach().permute((1, 2, 0)).cpu().numpy().clip(0, 1) * 255.0).round().astype(np.uint8)
cv2.imwrite(str(recon_path), recon_img)
if paths[0].endswith(sample_fn):
sample_recon = recon_amp[0]
sample_poh = z['output_poh'][0]
magnitude = torch.abs(prop['G_out'][0])
log_magnitude = torch.log1p(magnitude).permute(1,2,0)
log_magnitude_np = log_magnitude.squeeze().cpu().numpy()
log_magnitude_np -= log_magnitude_np.min()
log_magnitude_np /= log_magnitude_np.max()
log_magnitude_np *= 255
log_magnitude_np = log_magnitude_np.astype(np.uint8)
hist = torch.histc(sample_poh.cpu().flatten(),bins=255,min=-3.5,max=3.5)
bins = torch.linspace(-3.5, 3.5, steps=256)
total_loss = (mloss.cpu() / len(dataloader)).tolist()
if savedir != None:
recon_fn = str(savedir / f"{fn_prefix}_recon.png")
poh_fn = str(savedir / f"{fn_prefix}_poh.png")
spec_fn = str(savedir / f"{fn_prefix}_spec.png")
hist_fn = str(savedir / f"{fn_prefix}_hist.png")
cv2.imwrite(recon_fn, (sample_recon.detach().permute((1,2,0)).cpu().numpy().clip(0,1) * 255.).astype(int))
cv2.imwrite(poh_fn, phasemap_8bit(sample_poh.detach().permute((1,2,0))))
cv2.imwrite(spec_fn, log_magnitude_np)
plt.bar(bins[:-1].cpu().numpy(), hist.cpu().numpy(), width=0.1, alpha=0.7)
plt.savefig(hist_fn)
plt.close()
if savedir is not None and per_image_metrics:
metrics_path = savedir / "metrics.csv"
with open(metrics_path, "w", newline="") as f:
writer = csv.DictWriter(f, fieldnames=["filename", "mse", "psnr"])
writer.writeheader()
writer.writerows(per_image_metrics)
return total_loss[0], total_loss[1], per_image_metrics
def main(opt):
save_dir, config, data = (
Path(opt.save_dir),
opt.config,
opt.data
)
val_save_dir = save_dir / "val"
val_save_dir.mkdir(parents=True, exist_ok=True)
# Hyperparameters
config = check_yaml(config)
if isinstance(config, str):
with open(config, errors="ignore") as f:
config = yaml.safe_load(f) # load configs dict
LOGGER.info(prefix("[Configurations]") + ", ".join(f"{k}={v}" for k, v in config.items()))
opt.config = config.copy() # for saving configs to checkpoints
device = select_device(opt.device, batch_size=1)
# Save run settings
yaml_save(val_save_dir / "config.yaml", config)
yaml_save(val_save_dir / "opt.yaml", vars(opt))
data = check_yaml(data)
data_dict = check_dataset(data) # check if None
val_path = data_dict["val"]
# Model
M = config['model']
model_name = M['name']
model = model_selector(model_name, config, device)
weight = torch.load(opt.weight, map_location=device)['model']
torch.save({'model': weight}, val_save_dir / 'weight.pt')
model.load_state_dict(weight)
model = model.to(device)
val_loader, _ = create_dataloader(
val_path,
batch_size = 1,
config=config['data'],
augment=False,
cache='ram',
rank=-1,
workers=2,
prefix=prefix("[valid loader]"),
shuffle=False,
seed=opt.seed
)
mse, psnr, per_image_metrics = val(
model = model,
dataloader = val_loader,
config = config,
savedir = val_save_dir,
save_all_poh = opt.save_all_poh,
save_all_recon = opt.save_all_recon,
device = device,
)
header = ("%11s " * 2) % ("MSE", "PSNR")
values = ("%11f " * 2) % (mse, psnr)
with open(val_save_dir / 'output.txt', 'w') as f:
f.write(header + '\n')
f.write(values + '\n')
summary = {
"num_images": len(per_image_metrics),
"mse": mse,
"psnr": psnr,
}
with open(val_save_dir / "summary.json", "w") as f:
json.dump(summary, f, indent=2)
def parse_opt():
parser = argparse.ArgumentParser()
parser.add_argument("--config", type=str, default="baseline.yaml")
parser.add_argument("--data", type=str, default="div2k.yaml")
parser.add_argument("--weight", type=str, default=None, help='pretrained/nhvc_base_g.pt')
parser.add_argument("--project", type=str, default="NHVC")
parser.add_argument("--name", type=str, default="pretrained")
parser.add_argument("--seed", type=int, default=42)
parser.add_argument("--device", type=str, default="", help="cuda device, i.e. 0 or 0,1,2,3 or cpu")
parser.add_argument("--save-all-poh", action="store_true", help="save POH for every validation image")
parser.add_argument("--save-all-recon", action="store_true", help="save recon for every validation image")
return parser.parse_args()
if __name__ == "__main__":
opt = parse_opt()
print_args(vars(opt))
assert opt.weight != None, "weight shouldn't be None"
opt.save_dir = str(increment_path(Path(opt.project) / opt.name, exist_ok=True))
main(opt)