Starting Rieke OS
Verifying the complete app and its private runtime.
{EXPORT_FORMATS[format]?.description || 'Choose a supported output format to continue. The saved export keeps its original format.'}
Export scope · {number(counts.cells)} matching cells
Uses this protocol’s saved query and current filters. Focusing a cell or checking bulk-action targets does not restrict this export.
- Matching epochs
- {number(counts.epochs)}
- Included
- {number(counts.included)}
- Excluded
- {number(counts.excluded)}
- Already in saved exports
- {number(counts.exported ?? 0)}
- Not marked reviewed
- {number(held)}
- Ready to export
- {exportBlocked?'Source update needed':Number.isFinite(eligible)?number(eligible):'Loading…'}
This retained dataset includes sources excluded from queries. Open Data stores and propagate the proposed changes before exporting.
:eligible===0?{policy==='approved_only'&&counts.included>0?'No included epochs are marked reviewed. Choose “Included epochs” to export without a review requirement, or mark review status during inspection.':tagFilterLabel(filters)?'No epochs match this tag filter. Clear or change the filter to export matching epochs.':'No epochs are included in this query. Change the query scope or include the epochs you want to export.'}
:{policy==='include_unreviewed'?'All included epochs are eligible; review is not required.':'Only included epochs marked reviewed are eligible.'} The server rechecks membership before saving. Each export remains a separate saved revision.
}{error}
}{result&&Previous exports
{treeLayout.save.status==='error'&&{protocol.reload();treeLayout.reload();}}>{data&&<>{exportOpen&&setExportOpen(false)} footer={exportFooter}>{exportPanel} }{tab==='inspect'?{setFilters(next);setResult(null);setError('');}} onTagFilter={onTagFilter} key={browseRequest} initialEpochUuid={initialEpoch} initialNavigation={inspectorSession.current} onSessionChange={rememberInspector} onQC={onQC} protocol={data} splitRecipe={splitOrder} onSplitChange={setSplitOrder} cellScope={scope} filters={filters} revision={revision} structureRevision={structureRevision} annotationChange={annotationChange} onChange={onChange} onBack={()=>setTab('overview')} onImport={onImport} onStores={onStores} onExport={()=>setExportOpen(true)}/>:{initialRecipe&&Reused saved query; matching the current catalog. Previous export unchanged. }{diff&&{diff.message || (diff.baseline_created?'Saved a comparison baseline.':`Query refreshed: ${typeof diff.diff?.added==='number'?diff.diff.added:diff.diff?.added?.length||0} added · ${typeof diff.diff?.changed==='number'?diff.diff.changed:diff.diff?.changed?.length||0} changed · ${typeof diff.diff?.removed==='number'?diff.diff.removed:diff.diff?.removed?.length||0} no longer matching`)}<>{diff.candidate_revision_uuid&&} }{error&&tab!=='export'&&Loading dataset summary… Filter results{Object.keys(filters).length>0&&}Group labels are original metadata, not inferred drug phases. <>{suggestionsError&&}
}};
}
function ImportPage({projectId,protocols,sources,onChange,onBack,jobs,suggestions=[],approvedHistory=[],suggestionsError,onRetrySuggestions,onReviewCandidate,onProtocol,queue}) {
const jobRecords=Array.isArray(jobs.data?.jobs)?jobs.data.jobs:[];
const blocked=queue.active;
const error=queue.error;
- return Tree layout could not be saved: {treeLayout.save.error}
}PROTOCOL WORKSPACE
{humanize(data.definition?.name)}
{data.binding?`Working dataset version ${data.binding.version}. Use Search predicate to compare and apply new source data.`:"A saved query into the project catalog. Inspection decisions stay linked to each epoch."}
{error}
}New-data suggestions could not load.
}{suggestion&&Cells in this protocol
ADD TO MAIN CATALOG
Import H5s
Choose one or more H5 recordings. New imports are copied into this project and verified before parsing.
Drop Symphony H5 files here
Rieke OS keeps a managed copy for lazy loading. Keep the original until the import confirms that its copy is ready. Identical files are recognized even when renamed.
Importing one file at a time · {queue.remaining} waiting. Keep this app tab open until the queue finishes.
}{error&&{error}
}{suggestionsError&&New-data suggestions could not load.
}Import history
Connection interrupted. Showing the last confirmed job history; use Refresh jobs to check again.
}ADD TO MAIN CATALOG
Import H5s
Choose one or more H5 recordings. New imports are copied into this project and verified before parsing.
Drop Symphony H5 files here
Rieke OS keeps a managed copy for lazy loading. Keep the original until the import confirms that its copy is ready. Identical files are recognized even when renamed.
Importing one file at a time · {queue.remaining} waiting. Keep this app tab open until the queue finishes.
}{error&&{error}
}{suggestionsError&&New-data suggestions could not load.
}Import history
Connection interrupted. Showing the last confirmed job history; use Refresh jobs to check again.
}PROJECT RECORD
{kind==='exports'?'Project export log':'Activity & logs'}
{kind==='exports'?'Saved protocol and one-off search exports. Reuse opens the saved query for review; it never exports automatically.':'A persistent record of imports, tags, review decisions and exports.'}
{reuseError}
}{(result.data?.exports || []).length?(result.data.exports).map((e,i)=>Use Search predicate to export a matching selection directly, or export from a protocol workspace. }
:{e.format==='wheeler-sqlite'?:} {exportDownloadLabel(e.format)} }
):{e.name || e.filename || e.export_uuid}
{(e.dataset_uuid || e.export_uuid)&&}{e.download_url&&{e.export_scope?.kind==='explorer_candidate'?'One-off search':'Protocol export'} · {time(e.created_at || e.at)} · {number(e.epoch_count ?? e.membership?.length)} epochs · {exportFormatLabel(e.format)}
Export record & provenance
{JSON.stringify(e,null,2)}{folderOpen&&setFolderOpen(false)} onFiles={()=>setPage('files')}/>}{projectSetup&&navigation.canBack?navigation.back():setPage('overview')}/>:page==='stores'?setPage('import')} onProtocol={navigate} onFiles={()=>setPage('files')} onLogs={()=>setPage('activity')}/>:!data?:page==='overview'?setPage('import')} onExplore={()=>explore()}/>:page==='explore'?explore(null,{},true)} onExit={()=>explore()} key={route.key} session={sessions.current.get(route.key) || (route.resumeExplorer?lastExplorerSession.current:null)} onSession={rememberExplorer} initialPredicate={explorePredicate} initialRevisionId={exploreRevisionId} initialExportIntent={exploreExportIntent} initialProtocolId={exploreTargetId} onProtocolApplied={protocolApplied} onChange={changed} revision={revision} protocols={data.protocols || []} onInspect={openInspection}/>:page==='protocol'?item.protocol_uuid===protocol)} suggestionsError={suggestionsResource.error} onRetrySuggestions={suggestionsResource.reload} initialRecipe={initialRecipe} initialInspection={initialInspection} onRefine={explore} onReviewCandidate={reviewCandidate} onStores={()=>setPage('stores')} id={protocol} revision={revision} onChange={changed} onImport={()=>setPage('import')}/>:page==='activity'?:page==='files'?setPage('stores')}/>:page==='import'?setPage('stores')} jobs={importJobs} suggestions={suggestionsResource.data?.suggestions||[]} approvedHistory={suggestionsResource.data?.approved_history||[]} suggestionsError={suggestionsResource.error} onRetrySuggestions={suggestionsResource.reload} onReviewCandidate={reviewCandidate} onProtocol={navigate}/>:}
{setup}
}{openingProject&&{projectError}
}{page==='cell-qc'?
{folderOpen&&setFolderOpen(false)} onFiles={()=>setPage('files')} onTransferComplete={()=>registry.reload()}/>}{setupDialog}{openingProject&&changed({kind:'annotations'})} onTagFilter={searchPredicate} key={`${route.cell_uuid}:${route.key}`} cellUuid={route.cell_uuid} initialEpochUuid={route.epoch_uuid} session={sessions.current.get(route.key)} onSession={rememberQC} revision={revision} onInspect={searchEpoch} onBack={()=>navigation.canBack?navigation.back():setPage('overview')}/>:page==='stores'?setPage('import')} onProtocol={navigate} onFiles={()=>setPage('files')} onLogs={()=>setPage('activity')}/>:!data?:page==='overview'?setPage('import')} onExplore={()=>explore()}/>:page==='explore'?explore(null,{},true)} onExit={()=>explore()} key={route.key} session={sessions.current.get(route.key) || (route.resumeExplorer?lastExplorerSession.current:null)} onSession={rememberExplorer} initialPredicate={explorePredicate} initialRevisionId={exploreRevisionId} initialExportIntent={exploreExportIntent} initialProtocolId={exploreTargetId} onProtocolApplied={protocolApplied} onChange={changed} revision={revision} protocols={data.protocols || []} onInspect={openInspection}/>:page==='protocol'?item.protocol_uuid===protocol)} suggestionsError={suggestionsResource.error} onRetrySuggestions={suggestionsResource.reload} initialRecipe={initialRecipe} initialInspection={initialInspection} onRefine={explore} onReviewCandidate={reviewCandidate} onStores={()=>setPage('stores')} id={protocol} revision={revision} structureRevision={structureRevision} annotationChange={annotationChange} onChange={changed} onImport={()=>setPage('import')}/>:page==='activity'?:page==='files'?setPage('stores')} onFolder={openingProject||!currentProject?undefined:()=>setFolderOpen(true)}/>:page==='import'?setPage('stores')} jobs={importJobs} suggestions={suggestionsResource.data?.suggestions||[]} approvedHistory={suggestionsResource.data?.approved_history||[]} suggestionsError={suggestionsResource.error} onRetrySuggestions={suggestionsResource.reload} onReviewCandidate={reviewCandidate} onProtocol={navigate}/>:}
{projectError}
}{page==='cell-qc'?Tags apply to {Number.isFinite(annotationData?.cell_epoch_count)?number(annotationData.cell_epoch_count):'all'} epochs in this cell.
}{if(!event.currentTarget.contains(event.relatedTarget))setOpen(false);}}>
{open&&
- {(profileError||annotations.error||error)&&{suggestions.loading?Finding tags…:suggestions.error?Suggestions unavailable; typed tags can still be saved.:items.length?items.map((item,index)=>):Type a tag, then click Add tag or press Enter.}
}{error||annotations.error||profileError}
} + {(profileError||annotations.error||error)&&{error||annotations.error||profileError}
} {remoteNeeded&&annotations.loading&&!annotationData?Loading annotations…:<>{scope==='epoch'&&Direct epoch tags
}{scope!=='selected'&&{chips(groups.epoch,'epoch')}{!groups.epoch.length&&None}
{scope==='cell'?'Cell tags':'Inherited from cell'} {!targetScope&&}
}}
{message&&{message}}
{children&&scope==='epoch'&&{chips(groups.cell,'cell')}{!groups.cell.length&&None}
Dataset-only tags
These existing tags belong to this protocol’s selection; they are separate from shared cell and epoch annotations.
{children}setNoticePaused(true)} onMouseLeave={()=>setNoticePaused(false)} onFocus={()=>setNoticePaused(true)} onBlur={event=>{if(!event.currentTarget.contains(event.relatedTarget))setNoticePaused(false);}}>
}
- {open&&{notice.message}
Saved view needs recovery
{draft.message}
+ {error&&{error}
} +
+ {draft.resetAllowed?:}
+
+
+