Issues

• Gap coordinates report

  enhancementgood first issueuser request

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#54 · Filter by author muffato opened on Jun 4, 2026 · v1.3.0

• Rename input parameters

  maintain

  MediumFilter by Priority: Medium
  Task

  sanger-tol/sequencecomposition#53 · Filter by author muffato opened on Jun 4, 2026 · v1.3.0

• EDTA2

  user request

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#46 · Filter by author muffato opened on Feb 19, 2026

• Centromer finder

  good first issuehelp wanted

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#45 · Filter by author muffato opened on Feb 19, 2026

• ModDotPlot

  good first issuehelp wanteduser request

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#28 · Filter by author muffato opened on Jun 17, 2024

• Stop codon frequency track

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#26 · Filter by author muffato opened on Jun 17, 2024

• DFAM

  good first issuehelp wanted

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#25 · Filter by author muffato opened on Jun 17, 2024

• LTR retrotransposons from LTRdigest

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#24 · Filter by author muffato opened on Jun 2, 2024

• Inverted repeats from einverted

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#23 · Filter by author muffato opened on Jun 2, 2024
  1

• Telomere finder (Max Brown)

  good first issuehelp wanted

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#22 · Filter by author muffato opened on Jun 2, 2024

• Telomere finder (Treeval)

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#21 · Filter by author muffato opened on Jun 2, 2024

• Earlgrey TE

  user request

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#20 · Filter by author muffato opened on Jun 2, 2024
  1

• Red

  good first issuehelp wanted

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#19 · Filter by author muffato opened on Jun 2, 2024
  1

• LTR retrotransposons from LTRharvest

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#18 · Filter by author muffato opened on Jun 2, 2024
  1

• Tandem repeats from trf

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#17 · Filter by author muffato opened on Jun 2, 2024
  1

• Dustmasker

  good first issuehelp wanted

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#16 · Filter by author muffato opened on Jun 2, 2024

• Add Pantera

  questionuser request

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#15 · Filter by author muffato opened on Jun 1, 2024
  1

• stainedglass self-alignment heatmap

  help wanteduser request

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#14 · Filter by author amakunin opened on Nov 28, 2023
  3

• TRASH (Tandem Repeat Annotation and Structural Hierarchy)

  help wanteduser request

  MediumFilter by Priority: Medium
  Feature

  sanger-tol/sequencecomposition#4 · Filter by author priyanka-surana opened on Jun 23, 2023
  1

• Genome mappability

  help wantedquestion

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#30 · Filter by author priyanka-surana opened on May 2, 2022
  4

• Transcript mappability

  help wantedquestion

  LowFilter by Priority: Low
  Feature

  sanger-tol/sequencecomposition#31 · Filter by author priyanka-surana opened on May 2, 2022
  1