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DRAGGON Lab website

Version 1 website for DRAGGON Lab: Developing, Researching, and Architecting Genetic and Genomic Networks.

Primary message: AI-aided biodesign platforms for programming biological systems.

The site is a modular public map of the DRAGGON Lab ecosystem at the University of Bristol: research interests, tools, publications, Lab Notes, teaching resources, people, project directions, workflows, and datasets.

Navigation

  • Research
  • Tools
  • Publications
  • Lab Notes
  • Teaching
  • People
  • Join / Collaborate

Research interests

  1. Biological Software Foundations
  2. Autonomous Laboratories
  3. AI-Aided Biodesign
  4. Digital Twins of Living Systems
  5. Intelligent Genetic & Genomic Networks

Tool ecosystem

Design: LOICA. Build: PUDU and BuildCompiler. Test: Flapjack workflows and Tricahue when ready. Learn: SeqTrainer. Infrastructure: SynBioSuite, SBOLInventory, SBOL/SynBioHub integrations.

Development

Use Node.js 22.13.0 and pnpm 10.28.1.

pnpm install
pnpm dev

Production-strict build:

pnpm build
pnpm preview

The Platform Ecosystem repository cards render from a checked-in snapshot, so local development and site builds never depend on GitHub availability. Deployments run pnpm sync:github with the Actions token before building; a failed refresh retains the last good snapshot. Run the command with GITHUB_TOKEN to refresh locally. To hide a repository, add its name to .github-repositories-ignore; optional maturity overrides following PyPI's Development Status taxonomy and editorial DBTL/Infrastructure assignments live in src/data/githubRepositoryConfig.ts.

Preview/draft-aware build:

pnpm build:preview
pnpm preview

Environment

PUBLIC_DEPLOY_ENV must be one of production, preview, or development. The default build is production-strict.

Documentation

  • docs/architecture.md
  • docs/design-spec.md
  • docs/content-model.md
  • docs/implementation-plan.md
  • docs/decisions.md
  • docs/deployment.md
  • docs/roadmap.md

Public site graph

The site exposes /site-graph.json, a machine-readable map of published research areas, tools, publications, Lab Notes, teaching resources, workflows, datasets, project directions, and people.

License

Code: MIT. Content: CC BY 4.0 unless otherwise noted. Logos and branding reserved.

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