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README: cluster-mate auditing is merged (#39) #41

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Merged
DylanYang merged 1 commit into from
Nov 10, 2026
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README: cluster-mate auditing is merged (#39) #41

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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -231,9 +231,9 @@ rfoldsearch attach-calibration --db target_nr80.pt \
Fitting audits high-scoring cluster leaders with US-align, excludes
structurally related members, and refits the model with replacement leaders
until no qualifying unaudited leaders remain.
Pending [PR #39](https://github.com/DylanYang/RFoldSearch/pull/39), eligible
unaudited members of a flagged leader's cluster within the current `E0` ceiling
will be checked together to reduce repeated fitting for large clusters.
When a leader is flagged, the eligible unaudited members of its cluster within
the current `E0` ceiling are checked in the same round, so a large related
cluster does not need one refit per member.
An interrupted fit reuses cached audits from `--workdir`, and precomputed
scores or TM-scores can be supplied (see `--help`).

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