build(deps): update dependencies

[DRL-NextGen]

Removed packages

Package	Version
cligj	0.7.2
distro	1.9.0

Added packages

Package	Version
agent-detector	1.1.0
httpx2-jsfetch	1.0
jsonnet	0.22.0
nccl4py	0.4.1
ray-haproxy	2.8.25

Upgraded packages

Package	From	To	Type
https://github.com/ibm/detect-secrets.git	(38ba7e335083e0a4db8c53e9be414795b27891e9)	—	🔴
https://github.com/BiomedSciAI/biomed-multi-alignment	(8cc56e9494b489ca86a63b76fa4cd2921f8af7f7)	—	🔴
https://github.com/UKAEA-IBM-STFC-Fusion-FMs/tokamind	(40acef326253e6e30d962b4b8da06716cf2f1263)	—	🔴
https://github.com/BiomedSciAI/biomed-multi-omic.git	(8b5694a922be7ccb1d3ee5c280c4dcef2eb95df9)	—	🔴
https://github.com/mathiaszinnen/focal_loss_torch.git	(69fd65795f2688c2c302029f383f1b58978c1123)	—	🔴
affine	2.4.0	3.0.1	🔴
alembic	1.19.0	1.19.1	🟢
anndata	0.11.4, v0.13.2	0.11.4, 0.13.3.post0	🔴
anthropic	0.120.2	1.2.0	🔴
apache-tvm-ffi	0.1.10	0.1.10, 0.1.11	🔴
appnope	0.1.4	1.0.0	🔴
build	1.5.0	1.6.0	🟡
charset-normalizer	3.4.9	3.5.1	🟡
click	8.4.2	8.5.0	🟡
cryptography	49.0.0, v50.0.0	49.0.0, 50.0.1	🟢
cuda-pathfinder	1.6.0	1.8.0	🟡
cuda-toolkit	13.0.2	13.0.2, 13.0.3.0	🟢
dask	2026.7.1	2026.8.0	🟡
databricks-sdk	0.124.0	0.133.0	🔴
deepmerge	2.1.0	3.0	🔴
diffusers	0.39.0	0.40.0	🔴
fastapi-cloud-cli	0.23.0	0.24.0	🔴
fastar	0.11.0	0.12.0	🔴
fastjsonschema	2.22.1	2.22.2	🟢
filelock	3.32.2	3.32.4	🟢
flashinfer-python	0.6.14	0.6.14, 0.6.16.post3	🔴
gitpython	3.1.58	3.1.61	🟢
google-api-core	2.33.0	2.34.0	🟡
google-auth	2.56.2	2.57.0	🟡
googleapis-common-protos	1.75.0	1.75.2	🟢
graphql-core	3.2.11	3.2.12	🟢
greenlet	3.5.4	3.5.5	🟢
grpcio	1.83.0	1.83.1	🟢
gunicorn	26.0.0	26.2.0	🟡
httpcore2	2.9.1	2.12.0	🟡
httpx2	2.9.1	2.12.0	🟡
huggingface-hub	1.26.0	1.29.0	🟡
humming-kernels	0.1.10	0.1.10, 0.1.12	🔴
hydra-core	1.3.4	1.3.6	🟢
idna	3.18	3.19	🟡
importlib-metadata	9.0.0	9.0.1	🟢
ipython	9.16.1	9.17.0	🟡
ipywidgets	8.1.8	8.1.9	🟢
jsonargparse	4.50.0	4.51.0	🟡
juliapkg	0.1.24	0.1.26	🔴
jupyter-client	8.9.1	8.10.0	🟡
jupyterlab-widgets	3.0.16	3.0.17	🟢
kiwisolver	1.5.0	1.5.1	🟢
litdata	0.2.67	0.2.72	🔴
mcp	1.19.0, v2.0.0	1.19.0, 2.1.1	🟢
mcp-types	2.0.0	2.1.1	🟡
ml-dtypes	0.5.4	0.6.0	🔴
mlflow	3.15.1	3.15.2	🟢
mlflow-skinny	3.15.1	3.15.2	🟢
mlflow-tracing	3.15.1	3.15.2	🟢
mmh3	5.2.1	5.3.0	🟡
msgpack	1.2.1	1.2.2	🟢
narwhals	2.24.0	2.25.0	🟡
nbformat	5.10.4	5.11.1	🟡
ninja	1.13.0	1.13.2	🟢
nvidia-cublas	13.1.0.3	13.1.0.3, 13.1.1.3, 13.6.1.10	🟢
nvidia-cudnn-cu13	9.19.0.56	9.19.0.56, 9.20.0.48	🟢
nvidia-cudnn-frontend	1.26.0	1.27.0	🟡
nvidia-cusparselt-cu13	0.8.0	0.8.0, 0.8.1	🔴
nvidia-cutlass-dsl	4.6.0	4.6.0, 4.6.2	🟢
nvidia-cutlass-dsl-libs-base	4.6.0	4.6.0, 4.6.2	🟢
nvidia-cutlass-dsl-libs-core	4.6.0	4.6.0, 4.6.2	🟢
nvidia-cutlass-dsl-libs-cu12	4.6.0	4.6.0, 4.6.2	🟢
nvidia-cutlass-dsl-libs-cu13	4.6.0	4.6.0, 4.6.2	🟢
nvidia-nccl-cu13	2.28.9	2.28.9, 2.29.7	🟢
nvidia-nvjitlink	13.0.88	13.0.88, 13.3.33	🟢
obstore	0.11.0	0.11.1	🔴
openai	2.53.0	3.6.0	🔴
optree	0.19.1	0.20.0	🔴
pandera	0.32.1	0.33.0	🔴
patsy	1.0.2	1.0.3	🟢
platformdirs	4.11.0	4.11.5	🟢
plotly	6.9.0	7.0.0	🔴
pre-commit	4.6.1	4.6.2	🟢
proto-plus	1.28.2	1.28.4	🟢
pyarrow	25.0.0	25.0.1	🟢
pybase64	1.4.3	1.5.0	🟡
pybind11	3.0.4	3.1.0	🟡
pydantic	2.13.4	2.13.5	🟢
pydantic-core	2.46.4	2.46.5	🟢
pydantic-settings	2.14.2	2.15.0	🟡
pygments	2.20.0	2.21.0	🟡
pymdown-extensions	11.0.1	11.0.2	🟢
pystac-ext-classification	2.0.0	2.0.1	🟢
pystac-ext-datacube	2.2.0	2.2.1	🟢
pystac-ext-eo	1.1.0	1.1.1	🟢
pystac-ext-file	2.1.0	2.1.1	🟢
pystac-ext-grid	1.1.0	1.1.1	🟢
pystac-ext-item-assets	1.0.0	1.0.1	🟢
pystac-ext-label	1.0.1	1.0.2	🟢
pystac-ext-mgrs	1.0.0	1.0.1	🟢
pystac-ext-mlm	1.4.0	1.4.1	🟢
pystac-ext-pointcloud	1.0.0	1.0.1	🟢
pystac-ext-projection	2.0.0	2.0.1	🟢
pystac-ext-raster	1.1.0	1.1.1	🟢
pystac-ext-sar	1.0.0	1.0.1	🟢
pystac-ext-sat	1.0.0	1.0.1	🟢
pystac-ext-scientific	1.0.0	1.0.1	🟢
pystac-ext-storage	2.0.0	2.0.1	🟢
pystac-ext-table	1.2.0	1.2.1	🟢
pystac-ext-timestamps	1.1.0	1.1.1	🟢
pystac-ext-version	1.2.0	1.2.1	🟢
pystac-ext-view	1.0.0	1.0.1	🟢
pystac-ext-xarray-assets	1.0.0	1.0.1	🟢
python-discovery	1.5.1	1.6.0	🟡
python-dotenv	1.2.2	1.2.3	🟢
python-json-logger	4.1.0	4.2.0	🟡
pyzmq	27.1.0	27.2.0	🟡
quack-kernels	0.6.1	0.6.3, 0.6.4	🔴
rasterio	1.5.0	1.5.1	🟢
ray	2.56.1	2.58.0	🟡
regex	2026.7.19	2026.8.31	🟡
ruff	0.16.1	0.16.5	🔴
scanpy	1.12.3	1.12.4	🟢
scipy	1.18.0	1.18.1	🟢
scverse-misc	0.1.3	0.1.4	🔴
sentry-sdk	2.66.1	2.68.1	🟡
soupsieve	2.9.1	2.9.2	🟢
sqlalchemy	2.0.51	2.0.52	🟢
sqlparse	0.5.5	0.6.0	🔴
starlette	1.4.0	1.6.0	🟡
statsmodels	0.14.6	0.15.0	🔴
stringzilla	5.0.7	5.1.2	🟡
tifffile	2026.7.31	2026.8.23	🟡
tiktoken	0.13.0	0.14.0	🔴
tilelang	0.1.9	0.1.9, 0.1.12	🔴
timm	1.0.28	1.0.29	🟢
tokenizers	0.22.2	0.23.1	🔴
torch	2.11.0	2.11.0, 2.13.0	🟢
torch-einops-utils	0.1.20	0.1.22	🔴
torchcodec	0.15.0	0.16.0	🔴
torchgeo	0.9.0	0.10.0	🔴
torchvision	0.26.0	0.26.0, 0.28.0	🔴
tornado	6.5.7	6.5.8	🟢
transformers	5.14.1	5.16.1	🟡
triton	3.6.0	3.6.0, 3.7.1	🟢
typer	0.27.1	0.27.2	🔴
typing-inspection	0.4.2	0.4.4	🔴
uv	0.12.1	0.12.7	🔴
uvicorn	0.52.1	0.52.4	🔴
virtualenv	21.7.1	21.7.7	🟢
vit-pytorch	1.24.2	1.26.2	🟡
vllm	0.26.0	0.26.0, 0.28.0	🔴
wcwidth	0.8.2	0.8.3	🔴
websockets	17.0.1	17.1	🟡
widgetsnbextension	4.0.15	4.0.16	🟢
wrapt	2.3.0	2.4.0	🟡
x-transformers	2.25.5	2.28.2	🟡
xxhash	3.8.1	4.0.1	🔴
zensical	0.0.53	0.0.57	🔴