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MiguelBdR/README.md

Miguel Barquin del Romo

Computational biologist studying how alternative polyadenylation and terminal exon usage diversify the transcriptome across cell types, at single-cell resolution. Doctoral degree in Natural Sciences, University of Konstanz (defended October 2026). Before that, five years of wet-lab and clinical cancer research.

Currently looking for postdoctoral positions in computational genomics.

  • 🔬 Doctoral thesis: Alternative polyadenylation as a source of transcriptome diversity
  • 📄 First author in Nucleic Acids Research, Cancer Epidemiology and Pathology - Research and Practice
  • 🛠️ Python · R · Snakemake · HPC/cluster computing
  • 📫 LinkedIn · ORCID · Google Scholar

Selected work

  • 🧬 nTerminalExon: Snakemake pipeline for identifying novel terminal exons from RNA-seq data using TECtool; supports local and cluster execution.
  • 🧬 scTEA-db: public web database of novel terminal exon isoforms from human single-cell transcriptomes.

Both are companion resources for our Nucleic Acids Research paper.

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  1. gruber-sciencelab/nTerminalExon gruber-sciencelab/nTerminalExon Public

    Python