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feat: KB/DB versioning and CocoIndex-based incremental workspace ingest - #28

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jjk9090 wants to merge 4 commits into
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jjk9090:feat/incremental-update-versioning
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jjk9090 wants to merge 4 commits into
OpenDCAI:mainfrom
jjk9090:feat/incremental-update-versioning

fix: correct tool descriptions, error messages, and add cocoindex dep

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