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@Rappsilber-Laboratory

Rappsilber Laboratory

Our mission is to develop approaches to study protein structure and interactions in cells and make them universally accessible and useful.

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  1. AlphaLink2 AlphaLink2 Public

    AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer

    Python 69 21

  2. XiSearch XiSearch Public

    XiSearch

    Java 18 7

  3. xiRT xiRT Public

    Multi-Dimensional Retention Time Prediction for Linear and Crosslinked Peptides

    Python 12 2

  4. ProteomeHD ProteomeHD Public

    Forked from georgkus/ProteomeHD

    R scripts and data related to the manuscript "Co-regulation map of the human proteome enables identification of protein functions" by Kustatscher et al (https://www.nature.com/articles/s41587-019-0…

    R 8

  5. xiFDR xiFDR Public

    Forked from lutzfischer/xiFDR

    Generic FDR-Calculation for cross-linked PSMs and resulting peptide pairs, links and protein pairs

    Java 7 4

  6. xiview xiview Public

    Forked from martingraham/CLMS-UI

    JavaScript 4 2

Repositories

Showing 10 of 63 repositories
  • xicommon Public

    common library used by python projects working with mass-spectrometric data

    Rappsilber-Laboratory/xicommon's past year of commit activity
    Python 0 LGPL-3.0 0 0 1 Updated Sep 30, 2026
  • xiFDR-py Public
    Rappsilber-Laboratory/xiFDR-py's past year of commit activity
    Python 1 AGPL-3.0 0 1 1 Updated Sep 25, 2026
  • XiSearch Public

    XiSearch

    Rappsilber-Laboratory/XiSearch's past year of commit activity
    Java 18 Apache-2.0 7 26 2 Updated Sep 23, 2026
  • xiFDR Public Forked from lutzfischer/xiFDR

    Generic FDR-Calculation for cross-linked PSMs and resulting peptide pairs, links and protein pairs

    Rappsilber-Laboratory/xiFDR's past year of commit activity
    Java 7 Apache-2.0 6 11 0 Updated Sep 22, 2026
  • xiview-server Public
    Rappsilber-Laboratory/xiview-server's past year of commit activity
    HTML 0 Apache-2.0 4 1 0 Updated Sep 18, 2026
  • xiview Public Forked from martingraham/CLMS-UI
    Rappsilber-Laboratory/xiview's past year of commit activity
    JavaScript 4 GPL-3.0 7 8 0 Updated Sep 17, 2026
  • MetaXtract Public

    MetaXtract is designed for extracting and visualizing metadata from Thermo RAW files

    Rappsilber-Laboratory/MetaXtract's past year of commit activity
    HTML 2 Apache-2.0 2 0 0 Updated Sep 4, 2026
  • zipfile-deflate64 Public Forked from brianhelba/zipfile-deflate64

    Extract Deflate64 ZIP archives with Python's `zipfile` API.

    Rappsilber-Laboratory/zipfile-deflate64's past year of commit activity
    Python 0 Apache-2.0 9 0 0 Updated Sep 2, 2026
  • diann-weblauncher Public
    Rappsilber-Laboratory/diann-weblauncher's past year of commit activity
    TypeScript 0 0 0 0 Updated Sep 1, 2026
  • KlinkPPI Public

    Combining different ppi databases

    Rappsilber-Laboratory/KlinkPPI's past year of commit activity
    Python 0 0 0 1 Updated Aug 28, 2026
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