Issues

• Visual artifacts in certain pathways

  datapplab/pathview#37 · Filter by author txemaheredia opened on May 7, 2026

• Error in array(col.rgb[, i], dim(node.rgb)[3:1])

  datapplab/pathview#32 · Filter by author Asa12138 opened on Feb 7, 2025
  1

• Issue with Pathview Recognizing KEGG Species Code "mflo" for Miscanthus floridulus

  datapplab/pathview#31 · Filter by author ashelylinluo opened on Dec 24, 2024

• Pathview web server does not show the selected pathway

  datapplab/pathview#30 · Filter by author emrahkirdok opened on Sep 19, 2024

• Failing to create PNGs from native KEGG pathways

  datapplab/pathview#29 · Filter by author nbartonicek opened on Feb 13, 2024

• Errors when using pathview with specific pathways

  datapplab/pathview#28 · Filter by author nvelden opened on Jul 20, 2023
  2

• Request to Replace Sweave Vignettes with R Markdown

  datapplab/pathview#27 · Filter by author sonali8434 opened on Jun 27, 2023
  1

• Error in img[pidx[i, 3]:pidx[i, 4], sel.px, 1:3] : only 0's may be mixed with negative subscripts

  datapplab/pathview#26 · Filter by author ErickMUO opened on Jun 21, 2023
  4

• Mapping KEGG drugs on KEGG pathways using pathview

  datapplab/pathview#25 · Filter by author jordlang01 opened on Feb 20, 2023
  1

• Problems finding my organism in pathview

  datapplab/pathview#24 · Filter by author hilariodc opened on Nov 11, 2022
  2

• How to change the fonts?

  datapplab/pathview#23 · Filter by author alhadjil opened on Nov 4, 2022

• No colorcode in the KEGG figure

  datapplab/pathview#22 · Filter by author Elseedy28 opened on Oct 12, 2022
  5

• Cannot output any pseudo colours

  datapplab/pathview#21 · Filter by author LuoJulia opened on Oct 4, 2022

• Some pathway , eg carbon metabolism ko01200 does not return with fold change

  datapplab/pathview#19 · Filter by author liuxianghui opened on Jul 20, 2022
  2

• Different colors for different samples in multi.state plots

  datapplab/pathview#18 · Filter by author Coayala opened on Jul 14, 2022
  1

• Download of hsa04110 xml file failed!

  datapplab/pathview#15 · Filter by author mewinners opened on Jun 14, 2022
  3

• Using pathview as an alternative to KEGG Mapper Reconstruct

  datapplab/pathview#12 · Filter by author silvtal opened on May 31, 2022
  2

• Issue with korg and newer species (almond)

  datapplab/pathview#10 · Filter by author alexjacobsCDS opened on Jan 31, 2022
  2

• paths.hsa lacks "Breast cancer" hsa05224 pathway

  datapplab/pathview#9 · Filter by author mdozmorov opened on Jan 18, 2022
  2

• round problem and legend

  datapplab/pathview#7 · Filter by author ArthurPERE opened on Aug 13, 2021
  1

• different limits and pre-defined '0' colour

  datapplab/pathview#1 · Filter by author alimayy opened on Mar 30, 2021
  6