All pull requests

Pull requests

• feat(l2g): eQTL colocalisation in disease-enriched biosamples

  DatasetdocumentationFeatureMethodsize-LStep
  #1312·addramir opened Oct 9, 2026Contributor·

  ·
  3

• feat(l2g): compute pathway enrichment from release GO and Reactome

  DatasetdocumentationFeatureMethodsize-XLStep
  #1311·addramir opened Oct 8, 2026Contributor·

  ·
  4

• feat(l2g): predicted pleiotropy prior and approxPops features

  DatasetdocumentationFeatureMethodsize-XLStep
  #1310·addramir opened Oct 8, 2026Contributor·

  ·
  6

• chore: trigger release process

  auto-prChoreDatasetDatasourcedocumentationMethodsize-XLStep
  #1308·github-actions[bot] opened Oct 1, 2026Bot·

  ·

• feat(finngen_multiome): ingest FinnGen multiome single-cell eQTL fine-mapping

  DatasourcedocumentationFeaturesize-LStep
  #1307·addramir opened Oct 1, 2026Contributor·8 of 9 tasks·

  ·
  16

• Biosample enrichment catalogue schema

  #1306·Tobi1kenobi opened Oct 1, 2026Contributor·

  ·

• chore(deps): bump python-semantic-release/publish-action from 10.6.1 to 10.7.0

  Choredependenciesgithub_actionssize-XS
  #1301·dependabot[bot] opened Sep 28, 2026Bot·

  ·

• chore(deps): bump docker/setup-qemu-action from 4.3.0 to 4.4.0

  dependenciesgithub_actions
  #1299·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• build(deps-dev): update ruff requirement from <0.16.0,>=0.8.1 to >=0.8.1,<0.17.0

  dependenciespython
  #1298·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• build(deps-dev): update pydoclint requirement from <0.9.0,>=0.3.8 to >=0.3.8,<0.10.0

  dependenciespython
  #1297·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• build(deps-dev): update pre-commit requirement from <4.6.0,>=4.0.0 to >=4.0.0,<4.7.0

  dependenciespython
  #1296·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• build(deps): update skops requirement from <0.15.0,>=0.13.0 to >=0.13.0,<0.16.0

  dependenciespython
  #1295·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• build(deps-dev): update lxml requirement from <6.1.0,>=5.1.0 to >=5.1.0,<6.2.0

  dependenciespython
  #1294·dependabot[bot] opened Sep 21, 2026Bot·

  ·

• feat(datasource): bigbrain molQTL ingestion

  DatasourcedocumentationFeatureMethodsize-XLStep
  #1293·xyg123 opened Sep 16, 2026Contributor·9 tasks·

  ·
  17

• feat: add PanUKBB LD pair extraction

  DatasetDatasourceFeatureMethodsize-XLStep
  #1273·project-defiant opened Jul 25, 2026Contributor·

  ·

• feat(method): LDSC genetic correlation logic

  FeatureMethodsize-XLStep
  #1262·xyg123 opened Jul 15, 2026Contributor·9 tasks·

  ·
  9

• chore: pre-commit autoupdate

  Choresize-S
  #1261·pre-commit-ci[bot] opened Jul 13, 2026Bot·

  ·

• feat(method): clumping update for rescaled effect size

  DatasetMethodsize-XLStep
  #1245·project-defiant opened Jun 25, 2026Contributor·9 tasks·

  ·

• feat(study_index): changes to study index required for rescaled effect computation

  DatasetFeatureMethodsize-XL
  #1243·project-defiant opened Jun 22, 2026Contributor·9 tasks·

  ·
  3

• feat!: introduce scoped dependencies

  DatasetDatasourcedocumentationFeatureMethodsize-LStep
  #1233·project-defiant opened Jun 14, 2026Contributor·4 tasks done·

  ·
  1

  10

• feat(method): add FUMA Gene2Func hypergeometric gene-set enrichment method

  documentationFeatureMethodsize-L
  #1229·xyg123 opened May 28, 2026Contributor·9 tasks·

  ·
  11

• feat(config): move from hydra to pydantic models

  #1221·project-defiant opened May 12, 2026Contributor·9 tasks·

  ·

• feat: adding class for multiple ancestry LD calculation

  DatasourceFeatureMethodsize-XL
  #670·addramir opened Jul 4, 2024Contributor·7 of 9 tasks·

  ·
  2

• feat: devcontainer development environment

  documentationFeaturesize-M
  #487·d0choa opened Feb 12, 2024Collaborator·

  ·
  6