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@Mayo-Radiology-Informatics-Lab Mayo Radiology Informatics Lab

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    18 repositories

    • MIDeL

      Public
      Jupyter Notebook
      •
      MIT License
      •12•25•0•0•Updated Jul 22, 2026Jul 22, 2026

    • EUS-PDFF

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 13, 2026May 13, 2026

    • liver-pdff-mil

      Public
      Video-based liver PDFF estimation using Multiple Instance Learning (MIL) with ablation across pooling aggregators.
      Jupyter Notebook
      •1•1•0•0•Updated Apr 27, 2026Apr 27, 2026

    • MedMNIST-Fine-Tuning-Framework

      Public
      A PyTorch-based framework for fine-tuning pretrained models on MedMNIST datasets with configurable training strategies.
      Python
      •
      MIT License
      •0•4•0•0•Updated Feb 17, 2026Feb 17, 2026

    • Vestibular-Schwannoma-Segmentation

      Public
      This repository provides tools and scripts for the segmentation of vestibular schwannomas from medical images using state-of-the-art deep learning models. The a…
      Python
      •0•1•0•0•Updated Oct 27, 2025Oct 27, 2025

    • LLM-Prompting-Fine-Tuning

      Public
      Jupyter Notebook
      •0•1•0•0•Updated May 31, 2025May 31, 2025

    • SIIM_Prompter

      Public
      Uses LLM to detect a specific finding in a collection of reports
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•0•Updated Jun 19, 2024Jun 19, 2024

    • conflare

      Public
      This is the repository for the CONFLARE (CONformal LArge language model REtrieval) Python package.
      Python
      •
      MIT License
      •3•21•0•0•Updated Apr 19, 2024Apr 19, 2024

    • RIL-workflow

      Public
      Python
      •0•0•0•1•Updated Feb 17, 2024Feb 17, 2024

    • Mayo-AI-Summit-23-Gen_AI

      Public
      Jupyter Notebook
      •1•1•0•0•Updated Jun 20, 2023Jun 20, 2023

    • ConfusionMatrix_Dice_Recall_with-cupy

      Public
      Scikitlearn 'confusion matrix' extraction is very slow for digital pathology images of 30k x 30k pixels. Instead cupy library with matrix multiplication could b…
      Python
      •2•0•0•0•Updated Mar 7, 2023Mar 7, 2023

    • XML_Annotation_modify_with_Python

      Public
      XML annotation format commonly used Imagescope and modyfying color of annotation for every object could be cumbersome. This script helps to change the color of …
      Python
      •1•0•0•0•Updated Feb 27, 2023Feb 27, 2023

    • XML_to_Binarymask_withPython

      Public
      This script helps to create binary mask files from XML based on the color of annotation. If you want to change the color of annotation, refer to another code in…
      Python
      •1•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • MBTI

      Public
      Multitask Brain Tumor Inpainting with Diffusion Models
      Python
      •
      Creative Commons Zero v1.0 Universal
      •3•41•3•0•Updated Dec 10, 2022Dec 10, 2022

    • SOUP-GAN

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•13•5•0•Updated Dec 1, 2022Dec 1, 2022

    • RSNA2023_YOLOv8_Workshop

      Public
      1•1•0•0•Updated Nov 24, 2022Nov 24, 2022

    • IDC_GoogleCloud_Notebook

      Public
      Deep-learning Nodule Segmentation using LIDC dataset on Google Cloud Platform (GCP).
      Jupyter Notebook
      •
      MIT License
      •2•3•0•0•Updated Jul 14, 2021Jul 14, 2021

    • IDC_GoogleCloud_Notebook_3DClassification

      Public
      Jupyter Notebook
      •3•3•0•0•Updated May 10, 2021May 10, 2021
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