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195 changes: 194 additions & 1 deletion CITATION.cff
Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ message: 'To cite package "composableIDModelR" in publications use:'
type: software
license: MIT
title: 'composableIDModelR: Composable Infectious Disease Models via ''ComposableTuringIDModels.jl'''
version: 0.2.0.9000
version: 0.3.0.9000
abstract: Provides an R interface to 'ComposableTuringIDModels.jl', the composable
probabilistic infectious disease modelling package of the 'EpiAware' ecosystem.
Models are assembled in R from reusable latent process, infection and observation
Expand Down Expand Up @@ -39,6 +39,129 @@ references:
year: '2026'
doi: 10.32614/R.manuals
version: '>= 4.1.0'
- type: software
title: checkmate
abstract: 'checkmate: Fast and Versatile Argument Checks'
notes: Imports
url: https://mllg.github.io/checkmate/
repository: https://CRAN.R-project.org/package=checkmate
authors:
- family-names: Lang
given-names: Michel
email: michellang@gmail.com
orcid: https://orcid.org/0000-0001-9754-0393
year: '2026'
doi: 10.32614/CRAN.package.checkmate
- type: software
title: distspec
abstract: 'distspec: Probability Distributions with Certain or Uncertain Parameters'
notes: Imports
url: https://epiforecasts.io/distspec/
repository: https://CRAN.R-project.org/package=distspec
authors:
- family-names: Funk
given-names: Sebastian
email: sebastian.funk@lshtm.ac.uk
orcid: https://orcid.org/0000-0002-2842-3406
- family-names: Azam
given-names: James M.
email: james.azam@lshtm.ac.uk
orcid: https://orcid.org/0000-0001-5782-7330
- family-names: Abbott
given-names: Sam
email: sam.abbott@lshtm.ac.uk
orcid: https://orcid.org/0000-0001-8057-8037
year: '2026'
doi: 10.32614/CRAN.package.distspec
version: '>= 0.2.0'
- type: software
title: ggplot2
abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
notes: Imports
url: https://ggplot2.tidyverse.org
repository: https://CRAN.R-project.org/package=ggplot2
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
orcid: https://orcid.org/0000-0003-4757-117X
- family-names: Chang
given-names: Winston
orcid: https://orcid.org/0000-0002-1576-2126
- family-names: Henry
given-names: Lionel
- family-names: Pedersen
given-names: Thomas Lin
email: thomas.pedersen@posit.co
orcid: https://orcid.org/0000-0002-5147-4711
- family-names: Takahashi
given-names: Kohske
- family-names: Wilke
given-names: Claus
orcid: https://orcid.org/0000-0002-7470-9261
- family-names: Woo
given-names: Kara
orcid: https://orcid.org/0000-0002-5125-4188
- family-names: Yutani
given-names: Hiroaki
orcid: https://orcid.org/0000-0002-3385-7233
- family-names: Dunnington
given-names: Dewey
orcid: https://orcid.org/0000-0002-9415-4582
- family-names: Brand
given-names: Teun
name-particle: van den
orcid: https://orcid.org/0000-0002-9335-7468
year: '2026'
doi: 10.32614/CRAN.package.ggplot2
- type: software
title: juliabridge
abstract: 'juliabridge: Bridge R Packages to Julia'
notes: Imports
url: https://epiforecasts.io/juliabridge/
authors:
- family-names: Funk
given-names: Sebastian
email: sebastian.funk@lshtm.ac.uk
orcid: https://orcid.org/0000-0002-2842-3406
year: '2026'
version: '>= 0.1.0'
- type: software
title: posterior
abstract: 'posterior: Tools for Working with Posterior Distributions'
notes: Imports
url: https://mc-stan.org/posterior/
repository: https://CRAN.R-project.org/package=posterior
authors:
- family-names: Bürkner
given-names: Paul-Christian
email: paul.buerkner@gmail.com
- family-names: Gabry
given-names: Jonah
email: jgabry@gmail.com
- family-names: Kay
given-names: Matthew
email: mjskay@northwestern.edu
- family-names: Vehtari
given-names: Aki
email: Aki.Vehtari@aalto.fi
year: '2026'
doi: 10.32614/CRAN.package.posterior
- type: software
title: rlang
abstract: 'rlang: Functions for Base Types and Core R and ''Tidyverse'' Features'
notes: Imports
url: https://rlang.r-lib.org
repository: https://CRAN.R-project.org/package=rlang
authors:
- family-names: Henry
given-names: Lionel
email: lionel@posit.co
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2026'
doi: 10.32614/CRAN.package.rlang
- type: software
title: stats
abstract: 'R: A Language and Environment for Statistical Computing'
Expand All @@ -52,4 +175,74 @@ references:
address: Vienna, Austria
year: '2026'
doi: 10.32614/R.manuals
- type: software
title: knitr
abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
notes: Suggests
url: https://yihui.org/knitr/
repository: https://CRAN.R-project.org/package=knitr
authors:
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
year: '2026'
doi: 10.32614/CRAN.package.knitr
- type: software
title: rmarkdown
abstract: 'rmarkdown: Dynamic Documents for R'
notes: Suggests
url: https://pkgs.rstudio.com/rmarkdown/
repository: https://CRAN.R-project.org/package=rmarkdown
authors:
- family-names: Allaire
given-names: JJ
email: jj@posit.co
- family-names: Xie
given-names: Yihui
email: xie@yihui.name
orcid: https://orcid.org/0000-0003-0645-5666
- family-names: Dervieux
given-names: Christophe
email: cderv@posit.co
orcid: https://orcid.org/0000-0003-4474-2498
- family-names: McPherson
given-names: Jonathan
email: jonathan@posit.co
- family-names: Luraschi
given-names: Javier
- family-names: Ushey
given-names: Kevin
email: kevin@posit.co
- family-names: Atkins
given-names: Aron
email: aron@posit.co
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
- family-names: Cheng
given-names: Joe
email: joe@posit.co
- family-names: Chang
given-names: Winston
email: winston@posit.co
- family-names: Iannone
given-names: Richard
email: rich@posit.co
orcid: https://orcid.org/0000-0003-3925-190X
year: '2026'
doi: 10.32614/CRAN.package.rmarkdown
- type: software
title: testthat
abstract: 'testthat: Unit Testing for R'
notes: Suggests
url: https://testthat.r-lib.org
repository: https://CRAN.R-project.org/package=testthat
authors:
- family-names: Wickham
given-names: Hadley
email: hadley@posit.co
year: '2026'
doi: 10.32614/CRAN.package.testthat
version: '>= 3.2.0'