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2 changes: 1 addition & 1 deletion VERSION
Original file line number Diff line number Diff line change
@@ -1 +1 @@
2.1.1
2.2.0
74 changes: 34 additions & 40 deletions document/models.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@
from core.models import CommonControlField
from source.models import Source

METADATA_ITERATOR_CHUNK_SIZE = 2000


class Document(CommonControlField):
DOCUMENT_TYPE_ARTICLE = "article"
Expand Down Expand Up @@ -222,65 +224,57 @@ def delete_documents_by_raw_id(cls, collection, raw_id):

@classmethod
def metadata(cls, collection=None):
queryset = cls.objects.select_related(
"collection",
"source",
"parent_document",
).only(
"collection__acron3",
queryset = cls.objects.all()
if collection:
queryset = queryset.filter(collection=collection)

queryset = queryset.values(
"default_lang",
"default_media_format",
"document_id",
"document_type",
"extra_data",
"files",
"identifiers",
"parent_document__document_id",
"pid_generic",
"pid_v2",
"pid_v3",
"processing_date",
"publication_date",
"publication_year",
"scielo_issn",
"source__scielo_issn",
"source__source_id",
"source__source_type",
"text_langs",
"title",
collection_acron3=models.F("collection__acron3"),
parent_document_identifier=models.F("parent_document__document_id"),
source_identifier=models.F("source__source_id"),
source_scielo_issn=models.F("source__scielo_issn"),
source_type_value=models.F("source__source_type"),
)

if collection:
queryset = queryset.filter(collection=collection)

for document in queryset.iterator():
source = document.source
for document in queryset.iterator(chunk_size=METADATA_ITERATOR_CHUNK_SIZE):
yield {
"collection": document.collection.acron3,
"default_lang": document.default_lang,
"default_media_format": document.default_media_format,
"document_id": document.document_id,
"document_type": document.document_type,
"extra_data": document.extra_data or {},
"files": document.files or {},
"identifiers": document.identifiers or {},
"parent_document_id": (
document.parent_document.document_id
if document.parent_document
else None
),
"pid_generic": document.pid_generic,
"pid_v2": document.pid_v2,
"pid_v3": document.pid_v3,
"processing_date": document.processing_date,
"publication_date": document.publication_date,
"publication_year": document.publication_year,
"scielo_issn": document.scielo_issn
or (source.scielo_issn if source else None),
"source_id": source.source_id if source else None,
"source_type": source.source_type if source else None,
"text_langs": document.text_langs or [],
"title": document.title,
"collection": document["collection_acron3"],
"default_lang": document["default_lang"],
"default_media_format": document["default_media_format"],
"document_id": document["document_id"],
"document_type": document["document_type"],
"extra_data": document["extra_data"] or {},
"files": document["files"] or {},
"identifiers": document["identifiers"] or {},
"parent_document_id": document["parent_document_identifier"],
"pid_generic": document["pid_generic"],
"pid_v2": document["pid_v2"],
"pid_v3": document["pid_v3"],
"processing_date": document["processing_date"],
"publication_date": document["publication_date"],
"publication_year": document["publication_year"],
"scielo_issn": document["scielo_issn"]
or document["source_scielo_issn"],
"source_id": document["source_identifier"],
"source_type": document["source_type_value"],
"text_langs": document["text_langs"] or [],
"title": document["title"],
}

class Meta:
Expand Down
45 changes: 24 additions & 21 deletions source/models.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@
from collection.models import Collection
from core.models import CommonControlField

METADATA_ITERATOR_CHUNK_SIZE = 2000


class Source(CommonControlField):
SOURCE_TYPE_JOURNAL = "journal"
Expand Down Expand Up @@ -198,9 +200,12 @@ def _extract_issns(identifiers):

@classmethod
def metadata(cls, collection=None):
queryset = cls.objects.select_related("collection").only(
queryset = cls.objects.all()
if collection:
queryset = queryset.filter(collection=collection)

queryset = queryset.values(
"acronym",
"collection__acron3",
"default_lang",
"extra_data",
"identifiers",
Expand All @@ -214,30 +219,28 @@ def metadata(cls, collection=None):
"subject_areas",
"title",
"wos_subject_areas",
collection_acron3=models.F("collection__acron3"),
)

if collection:
queryset = queryset.filter(collection=collection)

for source in queryset.iterator():
identifiers = source.identifiers or {}
for source in queryset.iterator(chunk_size=METADATA_ITERATOR_CHUNK_SIZE):
identifiers = source["identifiers"] or {}
yield {
"acronym": source.acronym,
"collection": source.collection.acron3,
"default_lang": source.default_lang,
"extra_data": source.extra_data or {},
"acronym": source["acronym"],
"collection": source["collection_acron3"],
"default_lang": source["default_lang"],
"extra_data": source["extra_data"] or {},
"identifiers": identifiers,
"issns": cls._extract_issns(identifiers),
"publication_date": source.publication_date,
"publication_year": source.publication_year,
"access_type": source.access_type,
"publisher_name": source.publisher_name or [],
"scielo_issn": source.scielo_issn,
"source_id": source.source_id,
"source_type": source.source_type,
"subject_areas": source.subject_areas or [],
"title": source.title,
"wos_subject_areas": source.wos_subject_areas or [],
"publication_date": source["publication_date"],
"publication_year": source["publication_year"],
"access_type": source["access_type"],
"publisher_name": source["publisher_name"] or [],
"scielo_issn": source["scielo_issn"],
"source_id": source["source_id"],
"source_type": source["source_type"],
"subject_areas": source["subject_areas"] or [],
"title": source["title"],
"wos_subject_areas": source["wos_subject_areas"] or [],
}

class Meta:
Expand Down
36 changes: 29 additions & 7 deletions source/tests/test_services.py
Original file line number Diff line number Diff line change
Expand Up @@ -30,14 +30,36 @@ def test_metadata_exposes_generic_and_journal_fields(self):
extra_data={"country": "BR"},
)

metadata = list(Source.metadata(collection=collection))
with self.assertNumQueries(1):
metadata = list(Source.metadata(collection=collection))

self.assertEqual(len(metadata), 1)
self.assertEqual(metadata[0]["source_type"], Source.SOURCE_TYPE_JOURNAL)
self.assertEqual(metadata[0]["source_id"], "1234-5678")
self.assertEqual(metadata[0]["scielo_issn"], "1234-5678")
self.assertEqual(metadata[0]["issns"], {"1234-5678", "8765-4321"})
self.assertEqual(metadata[0]["title"], "Test Journal")
self.assertEqual(
metadata,
[
{
"access_type": None,
"acronym": "testjou",
"collection": "scl",
"default_lang": "en",
"extra_data": {"country": "BR"},
"identifiers": {
"electronic_issn": "1234-5678",
"print_issn": "8765-4321",
"doi": "10.1590/example",
},
"issns": {"1234-5678", "8765-4321"},
"publication_date": "2024-01-15",
"publication_year": "2024",
"publisher_name": ["SciELO"],
"scielo_issn": "1234-5678",
"source_id": "1234-5678",
"source_type": Source.SOURCE_TYPE_JOURNAL,
"subject_areas": ["Health Sciences"],
"title": "Test Journal",
"wos_subject_areas": ["Medicine"],
}
],
)


class BookSourceServiceTests(TestCase):
Expand Down
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