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CLI docs: Update for v0.42.0 - #1949

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cli-docs-v0.42.0

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CLI documentation update for v0.42.0

This draft PR was generated from the verified tw-jar.jar release asset. Raw metadata is attached to the workflow run and is not committed to the repository.

Resolved CLI changes

  • Visible commands: 181 → 234
  • Added commands: 53
  • Removed commands: 0
  • Commands with changed descriptions: 1
  • Commands with changed positional arguments: 1
  • Added, removed, or changed options: 52

Added commands

  • tw access-tokens
  • tw access-tokens add
  • tw access-tokens delete
  • tw access-tokens list
  • tw compute-envs disable
  • tw compute-envs enable
  • tw credentials federation-setup
  • tw data-links delete-content
  • tw data-links download-script
  • tw datasets disable-version
  • tw info versions
  • tw lineage
  • tw lineage downstream
  • tw lineage resolve
  • tw lineage search
  • tw lineage upstream
  • tw lineage view
  • tw managed-identities
  • tw managed-identities add
  • tw managed-identities credentials
  • tw managed-identities credentials add
  • tw managed-identities credentials delete
  • tw managed-identities credentials update
  • tw managed-identities delete
  • tw managed-identities list
  • tw managed-identities update
  • tw managed-identities view
  • tw members roles
  • tw organizations quotas
  • tw pipelines schema
  • tw roles
  • tw roles add
  • tw roles delete
  • tw roles list
  • tw roles permissions
  • tw roles update
  • tw roles view
  • tw runs star
  • tw runs unstar
  • tw runs view log
  • tw ssh-keys
  • tw ssh-keys add
  • tw ssh-keys delete
  • tw ssh-keys list
  • tw ssh-keys view
  • tw studios extend
  • tw studios logs
  • tw studios rename-checkpoint
  • tw studios star
  • tw studios unstar
  • tw teams update
  • tw teams view
  • tw teams workspaces

Changed command descriptions

  • tw runs delete

Changed positional arguments

  • tw datasets add

Option changes

  • tw actions add github: added --fusion-version
  • tw actions add github: added --tower-config
  • tw actions add github: changed --nextflow-version (description)
  • tw actions add tower: added --fusion-version
  • tw actions add tower: added --tower-config
  • tw actions add tower: changed --nextflow-version (description)
  • tw actions update: added --fusion-version
  • tw actions update: added --tower-config
  • tw actions update: changed --nextflow-version (description)
  • tw compute-envs add altair: added --propagate-head-job-options
  • tw compute-envs add aws-batch forge: added --dragen
  • tw compute-envs add aws-batch forge: added --dragen-ami-id
  • tw compute-envs add aws-batch forge: added --dragen-instance-type
  • tw compute-envs add aws-batch forge: added --log-group
  • tw compute-envs add aws-batch manual: added --log-group
  • tw compute-envs add aws-cloud: added --log-group
  • tw compute-envs add azure-cloud: added --key-vault-url
  • tw compute-envs add google-cloud: added --billing-export-table
  • tw compute-envs add google-cloud: added --project-id
  • tw compute-envs add lsf: added --propagate-head-job-options
  • tw compute-envs add moab: added --propagate-head-job-options
  • tw compute-envs add seqera-compute: added --data-retention-policy
  • tw compute-envs add slurm: added --propagate-head-job-options
  • tw compute-envs add uge: added --propagate-head-job-options
  • tw credentials add aws: changed --mode (description)
  • tw credentials add google: changed --mode (description)
  • tw credentials add google: changed --token-audience (description)
  • tw credentials delete: added --force
  • tw credentials update aws: changed --mode (description)
  • tw credentials update google: changed --mode (description)
  • tw credentials update google: changed --token-audience (description)
  • tw datasets add: added --url
  • tw datasets update: added --url
  • tw datasets update: changed --file, -f (description)
  • tw launch: added --fusion-version
  • tw launch: added --tower-config
  • tw launch: changed --nextflow-version (description)
  • tw launch: changed --wait (description)
  • tw pipelines add: added --fusion-version
  • tw pipelines add: added --tower-config
  • tw pipelines add: changed --nextflow-version (description)
  • tw pipelines update: added --fusion-version
  • tw pipelines update: added --tower-config
  • tw pipelines update: changed --nextflow-version (description)
  • tw runs delete: changed -i, -id (description, value shape, type)
  • tw runs relaunch: added --fusion-version
  • tw runs relaunch: added --tower-config
  • tw runs relaunch: changed --nextflow-version (description)
  • tw studios add: changed --mount-data-uris (description)
  • tw studios add-as-new: changed --mount-data-uris (description)
  • tw studios start: changed --mount-data-uris (description)
  • tw studios update: changed --mount-data-uris (description)

Required review

  • Confirm generated command and option changes against release notes and tw ... --help.
  • Update or remove overlays affected by renamed or removed commands.
  • Add conceptual guidance or examples for new behavior; do not infer unsupported examples.
  • Check the command index and sidebar placement for new top-level commands.
  • Build the Platform CLI docset and inspect the preview.

Use .claude/skills/review-cli-docs-release/SKILL.md for the evidence and inference workflow.

@seqeralabs-docs-app seqeralabs-docs-app Bot added auto-generated cli documentation Improvements or additions to documentation labels Oct 9, 2026
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