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Lieber Institute for Brain Development

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  1. spatialLIBD spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    R 114 24

  2. HumanPilot HumanPilot Public

    Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project

    HTML 97 29

  3. recount3 recount3 Public

    Explore and download data from the recount3 project

    R 42 5

  4. spatialDLPFC spatialDLPFC Public

    spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples

    HTML 35 6

  5. 10xPilot_snRNAseq-human 10xPilot_snRNAseq-human Public

    10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC

    HTML 29 10

  6. dotdotdot dotdotdot Public

    Example vignette for dotdotdot software

    MATLAB 19 11

Repositories

Showing 10 of 141 repositories
  • LFF_spatial_ERC Public

    LFF_spatial_ERC

    LieberInstitute/LFF_spatial_ERC's past year of commit activity
    HTML 2 MIT 0 2 0 Updated Oct 10, 2026
  • spatialDLPFC_mdd_bpd Public

    spatialDLPFC_mdd_bpd

    LieberInstitute/spatialDLPFC_mdd_bpd's past year of commit activity
    HTML 0 0 0 0 Updated Oct 10, 2026
  • Hb_multiome Public

    Human Habenula Multiome Project

    LieberInstitute/Hb_multiome's past year of commit activity
    HTML 0 MIT 0 6 0 Updated Oct 9, 2026
  • spatialDLPFC_SCZ Public

    Visium-IF/RNAscope-IF project looking at spatial gene expression in the context of perineuronal nets in DLPFC of neurotypical control donors and donors with a diagnosis of schizophrenia

    LieberInstitute/spatialDLPFC_SCZ's past year of commit activity
    HTML 1 0 17 0 Updated Oct 9, 2026
  • spatialLIBD Public

    Code for the spatialLIBD R/Bioconductor package and shiny app

    LieberInstitute/spatialLIBD's past year of commit activity
    R 114 Artistic-2.0 24 25 2 Updated Oct 8, 2026
  • LieberInstitute/Habenula_Visium's past year of commit activity
    HTML 0 MIT 0 3 0 Updated Oct 7, 2026
  • Posit_Connect_shiny_apps Public

    Code for Posit Connect R shiny apps (spatialLIBD, iSEE, ...)

    LieberInstitute/Posit_Connect_shiny_apps's past year of commit activity
    HTML 0 0 0 0 Updated Oct 6, 2026
  • globus Public

    LIBD Globus Share Endpoints

    LieberInstitute/globus's past year of commit activity
    HTML 0 1 0 0 Updated Oct 5, 2026
  • bdportal Public

    Brain data portal at LIBD. Not only brain data.

    LieberInstitute/bdportal's past year of commit activity
    JavaScript 0 0 2 1 Updated Oct 5, 2026
  • jhpce_module_source Public

    JHPCE module source files

    LieberInstitute/jhpce_module_source's past year of commit activity
    Shell 0 0 0 0 Updated Sep 29, 2026